Maximum eQTL Peaks and Nearby Genes

Estimated time: 30 minutes

Overview

Questions

• How do I display maximum eQTL peaks and nearby genes?

Objectives

• Explain how to use markdown with the new lesson template
• Demonstrate how to include pieces of code, figures, and nested challenge blocks

LOD plot for gene Hnf1b.

SNP association plot for gene Hnf1b.

Challenge 1: Can you do it?

What is the output of this command?

R

paste("This", "new", "lesson", "looks", "good")

Output

OUTPUT

[1] "This new lesson looks good"

Challenge 2: how do you nest solutions within challenge blocks?

Show me the solution

You can add a line with at least three colons and a solution tag.

Key Points

• Use .md files for episodes when you want static content
• Use .Rmd files for episodes when you need to generate output
• Run sandpaper::check_lesson() to identify any issues with your lesson
• Run sandpaper::build_lesson() to preview your lesson locally