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Quantitative Trait Mapping

Quantitative Trait Mapping
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Quantitative Trait Mapping

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EPISODES

Summary and Setup

1. Introduction to the Data Set

2. Input File Format

3. Calculating Genotype Probabilities

4. Performing a Genome Scan

5. Calculating A Kinship Matrix

6. Performing a genome scan with a linear mixed model

7. Performing a Genome Scan with Binary Traits

8. Finding Significant Peaks via Permutation

9. Finding QTL peaks

10. Estimating QTL effects

11. Integrating Gene Expression Data

12. QTL Mapping in Diversity Outbred Mice

Key Points
Glossary
Learner Profiles
Reference

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